Code for: Estimating treatment prolongation for persistent infectionsdoi:10.18710/U7RRKEDataverseNO2018-08-131Martinecz, Antal; Abel zur Wiesch, Pia, 2018, "Code for: Estimating treatment prolongation for persistent infections", https://doi.org/10.18710/U7RRKE, DataverseNO, V1Code for: Estimating treatment prolongation for persistent infectionsdoi:10.18710/U7RRKEMartinecz, AntalAbel zur Wiesch, PiaUiT The Arctic University of NorwayMathematica271176DataverseNOUiT The Arctic University of NorwayMartinecz, AntalMartinecz, Antal2018-08-05Mathematical SciencesMedicine, Health and Life SciencesAntibioticsPersistencetreatment lengthMathematical modelThis repository contains the Mathematica (11.3.0) notebooks that were used to generate figures for the approximation described in "Estimating treatment prolongation for persistent infections". The file
"fold increase in treatment length.nb" is used for Figure 4 and 5, and
"fold increase in treatment length.txt" is the text version of the code. The file "Efflux pumps.nb" is used for Figure 6 and 7, and "Efflux pumps.txt" is the text version of the code.This file uses the dataset found at https://datarep.app.ist.ac.at/53/, which has to be downloaded for the code to work.Program source codehttps://datarep.app.ist.ac.at/53/Antal Martinecz, Pia Abel zur Wiesch, Estimating treatment prolongation for persistent infections, Pathogens and Disease, Volume 76, Issue 6, August 2018, fty065, https://doi.org/10.1093/femspd/fty06510.1093/femspd/fty065Antal Martinecz, Pia Abel zur Wiesch, Estimating treatment prolongation for persistent infections, Pathogens and Disease, Volume 76, Issue 6, August 2018, fty065, https://doi.org/10.1093/femspd/fty06501_ReadmeFile.txttext/plainEfflux pumps.nbapplication/mathematicaEfflux pumps.txt.txt version of the Mathematica code with the same name text/plainfold increase in treatment length.nbapplication/mathematicafold increase in treatment length.txt.txt version of the Mathematica code with the same name text/plain