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Part 1: Document Description
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Citation |
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Title: |
Replication Data for: Terrestrial Inputs Shape Coastal Microbial Communities in a High Arctic Fjord (Isfjorden, Svalbard) |
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Identification Number: |
doi:10.18710/JDWLVA |
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Distributor: |
DataverseNO |
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Date of Distribution: |
2020-12-21 |
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Version: |
1 |
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Bibliographic Citation: |
Delpech, Lisa-Marie; Vonnahme, Tobias Reiner; Praebel, Kim; Wangensteen, Owen, 2020, "Replication Data for: Terrestrial Inputs Shape Coastal Microbial Communities in a High Arctic Fjord (Isfjorden, Svalbard)", https://doi.org/10.18710/JDWLVA, DataverseNO, V1 |
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Citation |
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Title: |
Replication Data for: Terrestrial Inputs Shape Coastal Microbial Communities in a High Arctic Fjord (Isfjorden, Svalbard) |
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Identification Number: |
doi:10.18710/JDWLVA |
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Authoring Entity: |
Delpech, Lisa-Marie (UiT The Arctic University of Norway) |
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Vonnahme, Tobias Reiner (UiT The Arctic University of Norway) |
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Praebel, Kim (UiT The Arctic University of Norway) |
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Wangensteen, Owen (UiT The Arctic University of Norway) |
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Producer: |
UiT The Arctic University of Norway |
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Date of Production: |
2020-03 |
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Software used in Production: |
cutadapt |
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Software used in Production: |
trimmomatic |
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Software used in Production: |
pear |
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Software used in Production: |
fastqc |
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Software used in Production: |
swarm |
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Software used in Production: |
sina |
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Software used in Production: |
R |
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Grant Number: |
TerrACE; project number 268458 |
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Grant Number: |
FreshFate; project number 132019 |
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Grant Number: |
Arctic SIZE; project number 01vm/h15 |
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Distributor: |
DataverseNO |
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Distributor: |
UiT The Arctic University of Norway |
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Access Authority: |
Vonnahme, Tobias Reiner |
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Depositor: |
Vonnahme, Tobias |
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Date of Deposit: |
2020-10-06 |
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Holdings Information: |
https://doi.org/10.18710/JDWLVA |
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Study Scope |
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Keywords: |
Computer and Information Science, Earth and Environmental Sciences, Metagenomics, land-Ocean interaction, microbial community, 16S rRNA, Svalbard, Fjord |
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Abstract: |
The dataset was taken in June and August 2019 in Isfjorden, Svalbard, an Arctic fjord system with various rivers and glaciers supplying meltwater in summer. The aim of the study is to investigate the effect of river inputs during the spring freshet and later in summer on bacterial and archaeal communities and diversity. We hypothesized that changes in dissolved organic matter and nutrient inputs, and increasing stratification shapes the fjord microbial communities. We sequenced the 16S rRNA gene of filtere water or sediment samples using the Illumina MiSeq PE technology and investigated environmental controls using multivariate statistics. |
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Date of Collection: |
2019-06-2020-03 |
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Country: |
Svalbard and Jan Mayen |
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Geographic Coverage: |
Isfjorden |
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Geographic Unit(s): |
fjord |
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Geographic Bounding Box: |
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Kind of Data: |
processed 16S amplicon sequencing data |
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Kind of Data: |
experimental |
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Methodology and Processing |
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Sources Statement |
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Data Access |
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Other Study Description Materials |
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Related Materials |
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McGovern, M., Pavlov, A. K., Deininger, A., Granskog, M. A., Leu, E., Søreide, J. E., et al. (2020). Terrestrial Inputs Drive Seasonality in Organic Matter and Nutrient Biogeochemistry in a High Arctic Fjord System (Isfjorden, Svalbard). Front. Mar. Sci. 7. doi:10.3389/fmars.2020.542563. |
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Related Studies |
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European Nucleotide Archive Project accession number: PRJEB40446 |
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Label: |
00_README_LMD_v2.txt |
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Notes: |
text/plain |
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Label: |
OTU_contingency_table.txt |
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Notes: |
text/plain |
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Label: |
taxonomy.txt |
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Notes: |
text/plain |