Replication Data for: A genome-wide association study of freezing tolerance in red clover (Trifolium pratense L.) germplasm of European origindoi:10.18710/WF1AGUDataverseNO2023-04-031Zanotto, Stefano; Ergon, Åshild, 2023, "Replication Data for: A genome-wide association study of freezing tolerance in red clover (Trifolium pratense L.) germplasm of European origin", https://doi.org/10.18710/WF1AGU, DataverseNO, V1Replication Data for: A genome-wide association study of freezing tolerance in red clover (Trifolium pratense L.) germplasm of European origindoi:10.18710/WF1AGUZanotto, StefanoErgon, ÅshildNorwegian University of Life Sciences (NMBU)727312DataverseNONorwegian University of Life Sciences (NMBU)Ergon, ÅshildErgon, Åshild Gunilla2023-03-19Agricultural SciencesMedicine, Health and Life Sciencesfreezing toleranceGWASlinkage disequilibriumred cloverTrifolium pratenseFreezing tolerance and genomic data for red clover accessions used for a genome-wide association study (GWAS) to identify loci associated with freezing tolerance in the EUCLEC collection of mostly European red clover accessions. Freezing tolerance was measured as LT50. The genomic data are allele frequencies of single nucleotide polymorphisms (SNPs) and short read-backed haplotypes called in genotype by sequencing-data on pools of DNA (pool-GBS); one pool of 200 individuals per accession. The data were used to generate genomic relationship matrices. SNP data were used to calculate linkage disequilibrium.Survival dataLT50 datagenomic relationship matrixGWAS results<a href="http://creativecommons.org/publicdomain/zero/1.0">CC0 1.0</a>Zanotto S, Ruttink T, Pégard M, Skøt L, Grieder C, Kölliker R, et al. A genome-wide association study of freezing tolerance in red clover (Trifolium pratense L.) germplasm of European origin. Frontiers in Plant Science. 2023;14.10.3389/fpls.2023.1189662Zanotto S, Ruttink T, Pégard M, Skøt L, Grieder C, Kölliker R, et al. A genome-wide association study of freezing tolerance in red clover (Trifolium pratense L.) germplasm of European origin. Frontiers in Plant Science. 2023;14.00_README.txttext/plain1_LT50_DATA.csvFreezing tolerance (LT50) data for all accessionstext/comma-separated-values2_SNP_FILTERED_allele frequencies per accession.csvAllele frequencies per accession for all SNPs used in the analysestext/comma-separated-values3_HAPLOTYPE_FILTERED_allele frequencies per accession.csvAllele frequencies per accession for all haplotype markers used in the analysestext/comma-separated-values4_Genomic Relationship Matrix_SNPs.csvGenomic relationship matrix based on SNP markerstext/comma-separated-values5_Genomic Relationship Matrix_HAPLOTYPES.csvGenomic relationship matrix based on haplotype markerstext/comma-separated-values