Persistent Identifier
|
doi:10.18710/JDWLVA |
Publication Date
|
2020-12-21 |
Title
| Replication Data for: Terrestrial Inputs Shape Coastal Microbial Communities in a High Arctic Fjord (Isfjorden, Svalbard) |
Author
| Delpech, Lisa-Marie (UiT The Arctic University of Norway)
Vonnahme, Tobias Reiner (UiT The Arctic University of Norway) - ORCID: 0000-0003-4339-5471
Praebel, Kim (UiT The Arctic University of Norway)
Wangensteen, Owen (UiT The Arctic University of Norway) |
Point of Contact
|
Use email button above to contact.
Vonnahme, Tobias Reiner (UiT The Arctic University of Norway) |
Description
| The dataset was taken in June and August 2019 in Isfjorden, Svalbard, an Arctic fjord system with various rivers and glaciers supplying meltwater in summer. The aim of the study is to investigate the effect of river inputs during the spring freshet and later in summer on bacterial and archaeal communities and diversity. We hypothesized that changes in dissolved organic matter and nutrient inputs, and increasing stratification shapes the fjord microbial communities. We sequenced the 16S rRNA gene of filtere water or sediment samples using the Illumina MiSeq PE technology and investigated environmental controls using multivariate statistics. (2020-10-06) |
Subject
| Earth and Environmental Sciences; Computer and Information Science |
Keyword
| Metagenomics
land-Ocean interaction
microbial community
16S rRNA
Svalbard
Fjord |
Language
| English |
Producer
| UiT The Arctic University of Norway (UiT) https://en.uit.no/ |
Production Date
| 2020-03 |
Production Location
| Norway |
Funding Information
| The Research Council of Norway: TerrACE; project number 268458
The FRAM Centre: FreshFate; project number 132019
Tromsø Research Foundation: Arctic SIZE; project number 01vm/h15 |
Distributor
| UiT The Arctic University of Norway (UiT The Arctic University of Norway) https://dataverse.no/dataverse/uit |
Depositor
| Vonnahme, Tobias |
Deposit Date
| 2020-10-06 |
Date of Collection
| Start Date: 2019-06 ; End Date: 2020-03 |
Data Type
| processed 16S amplicon sequencing data; experimental |
Software
| cutadapt, Version: 2.8
trimmomatic, Version: 0.39
pear, Version: 0.9.6
fastqc, Version: 0.11.9
swarm, Version: 3.0.0
sina, Version: 1.6.0
R, Version: 3.6.3 |
Related Material
| McGovern, M., Pavlov, A. K., Deininger, A., Granskog, M. A., Leu, E., Søreide, J. E., et al. (2020). Terrestrial Inputs Drive Seasonality in Organic Matter and Nutrient Biogeochemistry in a High Arctic Fjord System (Isfjorden, Svalbard). Front. Mar. Sci. 7. doi:10.3389/fmars.2020.542563. |
Related Dataset
| European Nucleotide Archive Project accession number: PRJEB40446 |