Replication Data for: Origin of marine invertebrate larvae on an Arctic inflow shelf

Version 1.1
Descôteaux, Raphaëlle; Huserbråten, Mats; Jørgensen, Lis Lindal; Renaud, Paul E.; Ingvaldsen, Randi B.; Ershova, Elizaveta A.; Bluhm, Bodil A., 2022, "Replication Data for: Origin of marine invertebrate larvae on an Arctic inflow shelf", https://doi.org/10.18710/DVYBTY, DataverseNO, V1
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Description

Date of data collection: 2017-09-02 to 2018-08-11

Geographic location of data collection: North of Svalbard (around 80 deg. N, 12.5 deg. E), as well as Barents Sea north (around 77.3 deg N, 28.5 deg. E) and south (around 75.5 deg. N, 30.0 deg. E) of Polar Front.

(2022-10-14)
This dataset is intended to provide the data and code used to produce the results and figures presented in the related publication cited here, whereby the possible origins of invertebrate larvae collected on the Barents Sea shelf are assessed. The dataset consists of two parts: one set of files is designed to replicate the particle tracking data analysis and the other to replicate the larval-adult distribution comparison analysis. (2022-10-14)
Subject Earth and Environmental Sciences
Keyword Meroplankton, Larval dispersal, Barents Sea, Arctic benthos, Species distributions, Particle tracking, DNA metabarcoding
Related Publication Descôteaux R, Huserbråten M, Jørgensen LL, Renaud PE, Ingvaldsen RB, Ershova EA, Bluhm BA (2022) Origin of marine invertebrate larvae on an Arctic inflow shelf. Mar Ecol Prog Ser 699:1-17. doi: 10.3354/meps14170
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00_README_Descoteaux2022.txt
Plain Text - 16.1 KB
Published Oct 21, 2022
9 Downloads
MD5: fd38dceb4d9b0ad9e3233c53a1b3d98c
Read me file describing each file included in the dataset with metadata.
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Adults_additional.csv
Adult-Larvae_comparison/Comma Separated Values - 537 B
Published Oct 21, 2022
17 Downloads
MD5: d764e77b37acded85ce58c34a05cf2dc
Adult benthic invertebrate occurence data found in published literature additional to that already found in GBIF (mined in R using package rgbif), the IMR dataset (not publicly available) and the Andrade et al., 2017 dataset (https://doi.org/10.1594/PANGAEA.877932)
Preview "Adult-Larvae_comparison/Adults_additional.csv"
Larvae_BOLD_mismatch.csv
Adult-Larvae_comparison/Comma Separated Values - 1.0 KB
Published Oct 21, 2022
7 Downloads
MD5: c3556dc93d0e4c08307bb0f22b8eb431
Taxonomic assignment of DNA sequences obtained manually from the BOLD website
Preview "Adult-Larvae_comparison/Larvae_BOLD_mismatch.csv"
Larvae_Code.Rmd
Adult-Larvae_comparison/Unknown - 26.5 KB
Published Oct 21, 2022
3 Downloads
MD5: 4433cea92d7b0b0d88ce1ab71392e831
R code used to produce the results and figures related to larval-adult distribution comparison
Larvae_OTU_table.csv
Adult-Larvae_comparison/Comma Separated Values - 2.2 MB
Published Oct 21, 2022
11 Downloads
MD5: e4ff2526d7e18b8aa306e09c11ffb241
OTU (operational taxonomic unit) table showing results of zooplankton samples DNA metabarcoding
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Larvae_SampleInfo.csv
Adult-Larvae_comparison/Comma Separated Values - 7.3 KB
Published Oct 21, 2022
7 Downloads
MD5: c7f2518c08c2ee31aec6412f0de40ee0
Zooplankton sample collection information
Preview "Adult-Larvae_comparison/Larvae_SampleInfo.csv"
Larvae_TaxoBLAST.csv
Adult-Larvae_comparison/Comma Separated Values - 455 B
Published Oct 21, 2022
6 Downloads
MD5: e8511572697512d0310f94973eb843c0
Taxonomic assignment of DNA sequences according to BLAST database accessed online
Preview "Adult-Larvae_comparison/Larvae_TaxoBLAST.csv"
Larvae_TaxoBOLD.csv
Adult-Larvae_comparison/Comma Separated Values - 2.6 MB
Published Oct 21, 2022
4 Downloads
MD5: da0aa7b50071f0f4cc2b33dd13169a5c
Taxonomic assignment of DNA sequences according to BOLD database accessed through R using package bold
Preview "Adult-Larvae_comparison/Larvae_TaxoBOLD.csv"
Particles_Code.Rmd
ParticleTracking/Unknown - 11.3 KB
Published Oct 21, 2022
0 Downloads
MD5: 3f668b77a72a7fdf5d2211b05bb52589
R code used to produce the results and figures related to the particle tracking analysis
Particles_Fall_130m.RData
ParticleTracking/Gzip Archive - 690.7 MB
Published Oct 21, 2022
2 Downloads
MD5: dd3e4b8ac90602c171abe5e4b61b9205
Results of particles tracking analysis for fall release (August 23, 2017) at 130 m depth
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