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2,311 to 2,320 of 12,879 Results
BRCA1+CDH1+CDKN2A+MGMT+MLH1.amplicons.bed
May 5, 2022 - Replication Data for: "epialleleR: an R/BioC package for quantifying and analysing low-frequency DNA methylation"
PLINK Binary - 181 B - MD5: e6ac254acd34c5bf2a7ffd9e2f5ba254
A Browser Extensible Data (BED) file containing genomic positions of amplicons.
capture-highdepth-bismark.time
May 5, 2022 - Replication Data for: "epialleleR: an R/BioC package for quantifying and analysing low-frequency DNA methylation"
Unknown - 203 B - MD5: ae95783cba8737279535e02405b38a46
Performance metrics (elapsed time) of high-depth capture sequencing data analysis
capture-highdepth-dragen39.log
May 5, 2022 - Replication Data for: "epialleleR: an R/BioC package for quantifying and analysing low-frequency DNA methylation"
Plain Text - 9.6 KB - MD5: 298c8b4f12111807fb76099345f0f075
Performance metrics (elapsed time) of high-depth capture sequencing data analysis
capture-highdepth-epi-meth-135.txt
May 5, 2022 - Replication Data for: "epialleleR: an R/BioC package for quantifying and analysing low-frequency DNA methylation"
Plain Text - 3.3 KB - MD5: e628e4be53626ab2991e10a2473a839b
Performance metrics (elapsed time) of high-depth capture sequencing data analysis
capture-lowdepth-bismark.time
May 5, 2022 - Replication Data for: "epialleleR: an R/BioC package for quantifying and analysing low-frequency DNA methylation"
Unknown - 640 B - MD5: 9b5d3bfb7e6e6fc01e11da48a9eb70fb
Performance metrics (elapsed time) of low-depth capture sequencing data analysis
capture-lowdepth-dragen39.log
May 5, 2022 - Replication Data for: "epialleleR: an R/BioC package for quantifying and analysing low-frequency DNA methylation"
Plain Text - 33.5 KB - MD5: b2e99870ce6ffaef91eb00024015b283
Performance metrics (elapsed time) of low-depth capture sequencing data analysis
capture-lowdepth-epi-meth-135.txt
May 5, 2022 - Replication Data for: "epialleleR: an R/BioC package for quantifying and analysing low-frequency DNA methylation"
Plain Text - 10.3 KB - MD5: 08b6bdf27e6187da82e5d7c01486aab0
Performance metrics (elapsed time) of low-depth capture sequencing data analysis
GRCh38.p13.NC_000019.10.fasta
May 5, 2022 - Replication Data for: "epialleleR: an R/BioC package for quantifying and analysing low-frequency DNA methylation"
Unknown - 56.7 MB - MD5: 9c21d40784cb90dc3b68a5dd75cc2de0
Genomic sequence of human chromosome 19
hg19ToHg38.over.chain
May 5, 2022 - Replication Data for: "epialleleR: an R/BioC package for quantifying and analysing low-frequency DNA methylation"
Unknown - 592.6 KB - MD5: 9267c9fef79b54962da8efadd0ddf6b6
Human hg19 to human hg38 liftover chain.
idat2beta.R
May 5, 2022 - Replication Data for: "epialleleR: an R/BioC package for quantifying and analysing low-frequency DNA methylation"
R Syntax - 2.5 KB - MD5: cca6332491fe3c5b0203eff3c5c2ccf8
An R script that processes GSE201689 data
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