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File Type: Archive

2,601 to 2,610 of 3,235 Results

SIMULATED-5-1000-0.025.data.Rdata Nov 30, 2020 - Replication Data for: "ramr: an R package for detection of rare aberrantly methylated regions" Gzip Archive - 351.9 MB - MD5: ee3bd504f36ffe850383a5d488bb6a95 An R data file containing the following objects: 1. simulated.ranges: a GRanges object containing simulated beta values for 485512 CpGs across 100 samples with aberrant methylation events introduced in some of the regions. 2. modified.regions.unique: a GRanges object containing g...
SIMULATED-5-1000-0.050.data.Rdata Nov 30, 2020 - Replication Data for: "ramr: an R package for detection of rare aberrantly methylated regions" Gzip Archive - 351.9 MB - MD5: 7f2d709785f68949cad639b577545039 An R data file which is similar to "data∕SIMULATED/SIMULATED-5-1000-0.025.data.Rdata", but was generated using "delta=0.050"
SIMULATED-5-1000-0.100.data.Rdata Nov 30, 2020 - Replication Data for: "ramr: an R package for detection of rare aberrantly methylated regions" Gzip Archive - 351.9 MB - MD5: bdfff1e851824f8481e6e85ef616fa18 An R data file which is similar to "data∕SIMULATED/SIMULATED-5-1000-0.025.data.Rdata", but was generated using "delta=0.100"
SIMULATED-5-1000-0.250.data.Rdata Nov 30, 2020 - Replication Data for: "ramr: an R package for detection of rare aberrantly methylated regions" Gzip Archive - 351.8 MB - MD5: 491f986c04f2e3f0404e94502a2cae67 An R data file which is similar to "data∕SIMULATED/SIMULATED-5-1000-0.025.data.Rdata", but was generated using "delta=0.250"
SIMULATED-5-1000-0.500.data.Rdata Nov 30, 2020 - Replication Data for: "ramr: an R package for detection of rare aberrantly methylated regions" Gzip Archive - 351.8 MB - MD5: 9c77b6926d9f5471894b8e6e290583b4 An R data file which is similar to "data∕SIMULATED/SIMULATED-5-1000-0.025.data.Rdata", but was generated using "delta=0.500"
tcga.coad.AMRs.Rdata Nov 30, 2020 - Replication Data for: "ramr: an R package for detection of rare aberrantly methylated regions" Gzip Archive - 188.6 MB - MD5: b07cf6d556a8cb446028d58fca583ca8 An R data file containing the following objects: 1. tcga.coad.ranges: GRanges object with TCGA-COAD subset of methylation beta values for adjacent and tumour tissue pairs. 2. tcga.coad.ramr.hg19: GRanges object with aberrantly methylated regions found in adjacent TCGA-COAD tissue...
TCGA-COAD.tcga.data.Rdata Nov 30, 2020 - Replication Data for: "ramr: an R package for detection of rare aberrantly methylated regions" Gzip Archive - 362.1 MB - MD5: b87f97f9113c17a700c08ed3b9e3f6ac An R data file containing the following objects: 1. tcga.data: an object containing beta values for 487192 CpGs across 192 samples from TCGA-COAD Illumina HumanMethylation 450 data set (https://portal.gdc.cancer.gov/). This data set was used to find epimutations undergoing positi...
to.remove.RData Nov 30, 2020 - Replication Data for: "ramr: an R package for detection of rare aberrantly methylated regions" Gzip Archive - 400.3 KB - MD5: 4611f9e92657d846cc2ea84eea518ea8 An R data file containing character vector with all polymorphic and non-specific Illumina HumanMethylation 450 probe IDs.
16S_TOB1.R1.fastq.gz Nov 26, 2020 - Replication data for: Subglacial upwelling in spring increases under-ice primary production Gzip Archive - 665.9 MB - MD5: b51af681014d29511828bebc35f372cf
16S_TOB1.R2.fastq.gz Nov 26, 2020 - Replication data for: Subglacial upwelling in spring increases under-ice primary production Gzip Archive - 869.8 MB - MD5: b8355c47385a1d2e52bf1f3852f07dcd

SIMULATED-5-1000-0.025.data.Rdata

Nov 30, 2020 - Replication Data for: "ramr: an R package for detection of rare aberrantly methylated regions"

Gzip Archive - 351.9 MB -

An R data file containing the following objects: 1. simulated.ranges: a GRanges object containing simulated beta values for 485512 CpGs across 100 samples with aberrant methylation events introduced in some of the regions. 2. modified.regions.unique: a GRanges object containing g...

SIMULATED-5-1000-0.050.data.Rdata

Nov 30, 2020 - Replication Data for: "ramr: an R package for detection of rare aberrantly methylated regions"

Gzip Archive - 351.9 MB -

An R data file which is similar to "data∕SIMULATED/SIMULATED-5-1000-0.025.data.Rdata", but was generated using "delta=0.050"

SIMULATED-5-1000-0.100.data.Rdata

Nov 30, 2020 - Replication Data for: "ramr: an R package for detection of rare aberrantly methylated regions"

Gzip Archive - 351.9 MB -

An R data file which is similar to "data∕SIMULATED/SIMULATED-5-1000-0.025.data.Rdata", but was generated using "delta=0.100"

SIMULATED-5-1000-0.250.data.Rdata

Nov 30, 2020 - Replication Data for: "ramr: an R package for detection of rare aberrantly methylated regions"

Gzip Archive - 351.8 MB -

An R data file which is similar to "data∕SIMULATED/SIMULATED-5-1000-0.025.data.Rdata", but was generated using "delta=0.250"

SIMULATED-5-1000-0.500.data.Rdata

Nov 30, 2020 - Replication Data for: "ramr: an R package for detection of rare aberrantly methylated regions"

Gzip Archive - 351.8 MB -

An R data file which is similar to "data∕SIMULATED/SIMULATED-5-1000-0.025.data.Rdata", but was generated using "delta=0.500"

tcga.coad.AMRs.Rdata

Nov 30, 2020 - Replication Data for: "ramr: an R package for detection of rare aberrantly methylated regions"

Gzip Archive - 188.6 MB -

An R data file containing the following objects: 1. tcga.coad.ranges: GRanges object with TCGA-COAD subset of methylation beta values for adjacent and tumour tissue pairs. 2. tcga.coad.ramr.hg19: GRanges object with aberrantly methylated regions found in adjacent TCGA-COAD tissue...

TCGA-COAD.tcga.data.Rdata

Nov 30, 2020 - Replication Data for: "ramr: an R package for detection of rare aberrantly methylated regions"

Gzip Archive - 362.1 MB -

An R data file containing the following objects: 1. tcga.data: an object containing beta values for 487192 CpGs across 192 samples from TCGA-COAD Illumina HumanMethylation 450 data set (https://portal.gdc.cancer.gov/). This data set was used to find epimutations undergoing positi...

to.remove.RData

Nov 30, 2020 - Replication Data for: "ramr: an R package for detection of rare aberrantly methylated regions"

Gzip Archive - 400.3 KB -

An R data file containing character vector with all polymorphic and non-specific Illumina HumanMethylation 450 probe IDs.

16S_TOB1.R1.fastq.gz

Nov 26, 2020 - Replication data for: Subglacial upwelling in spring increases under-ice primary production

Gzip Archive - 665.9 MB -

16S_TOB1.R2.fastq.gz

Nov 26, 2020 - Replication data for: Subglacial upwelling in spring increases under-ice primary production

Gzip Archive - 869.8 MB -

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