Metrics
1,818,397 Downloads
Contact Share
Featured Dataverses

In order to use this feature you must have at least one published or linked dataverse.

Publish Dataverse

Are you sure you want to publish your dataverse? Once you do so it must remain published.

Publish Dataverse

This dataverse cannot be published because the dataverse it is in has not been published.

Delete Dataverse

Are you sure you want to delete your dataverse? You cannot undelete this dataverse.

Advanced Search

2,341 to 2,350 of 13,103 Results
capture-highdepth-dragen39.log
May 5, 2022 - Replication Data for: "epialleleR: an R/BioC package for quantifying and analysing low-frequency DNA methylation"
Plain Text - 9.6 KB - MD5: 298c8b4f12111807fb76099345f0f075
Performance metrics (elapsed time) of high-depth capture sequencing data analysis
capture-highdepth-epi-meth-135.txt
May 5, 2022 - Replication Data for: "epialleleR: an R/BioC package for quantifying and analysing low-frequency DNA methylation"
Plain Text - 3.3 KB - MD5: e628e4be53626ab2991e10a2473a839b
Performance metrics (elapsed time) of high-depth capture sequencing data analysis
capture-lowdepth-bismark.time
May 5, 2022 - Replication Data for: "epialleleR: an R/BioC package for quantifying and analysing low-frequency DNA methylation"
Unknown - 640 B - MD5: 9b5d3bfb7e6e6fc01e11da48a9eb70fb
Performance metrics (elapsed time) of low-depth capture sequencing data analysis
capture-lowdepth-dragen39.log
May 5, 2022 - Replication Data for: "epialleleR: an R/BioC package for quantifying and analysing low-frequency DNA methylation"
Plain Text - 33.5 KB - MD5: b2e99870ce6ffaef91eb00024015b283
Performance metrics (elapsed time) of low-depth capture sequencing data analysis
capture-lowdepth-epi-meth-135.txt
May 5, 2022 - Replication Data for: "epialleleR: an R/BioC package for quantifying and analysing low-frequency DNA methylation"
Plain Text - 10.3 KB - MD5: 08b6bdf27e6187da82e5d7c01486aab0
Performance metrics (elapsed time) of low-depth capture sequencing data analysis
GRCh38.p13.NC_000019.10.fasta
May 5, 2022 - Replication Data for: "epialleleR: an R/BioC package for quantifying and analysing low-frequency DNA methylation"
Unknown - 56.7 MB - MD5: 9c21d40784cb90dc3b68a5dd75cc2de0
Genomic sequence of human chromosome 19
hg19ToHg38.over.chain
May 5, 2022 - Replication Data for: "epialleleR: an R/BioC package for quantifying and analysing low-frequency DNA methylation"
Unknown - 592.6 KB - MD5: 9267c9fef79b54962da8efadd0ddf6b6
Human hg19 to human hg38 liftover chain.
idat2beta.R
May 5, 2022 - Replication Data for: "epialleleR: an R/BioC package for quantifying and analysing low-frequency DNA methylation"
R Syntax - 2.5 KB - MD5: cca6332491fe3c5b0203eff3c5c2ccf8
An R script that processes GSE201689 data
minfi.array.data.Rdata
May 5, 2022 - Replication Data for: "epialleleR: an R/BioC package for quantifying and analysing low-frequency DNA methylation"
R Data - 56.0 MB - MD5: 365ba0fbc3d6491677cb890502c56cbb
An R data file containing the following objects: 1. array.ranges: a GRanges object containing beta values for 865859 CpGs across 8 samples from GSE201689 Illumina HumanMethylationEPIC data set (https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE201689). 2. array.ids: a character vector of sample IDs.
race.R
May 5, 2022 - Replication Data for: "epialleleR: an R/BioC package for quantifying and analysing low-frequency DNA methylation"
R Syntax - 1.8 KB - MD5: f5b6b82e519826d812a32b75ea856d1b
An R script that compares the processing speed of methods on amplicon- and capture-based sequencing data
Add Data

Log in to create a dataverse or add a dataset.

Log In
Share Dataverse

Share this dataverse on your favorite social media networks.

Link Dataverse
Reset Modifications

Are you sure you want to reset the selected metadata fields? If you do this, any customizations (hidden, required, optional) you have done will no longer appear.