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1,351 to 1,360 of 2,969 Results

S5_Supplementary_non-Bayesian_graphs_and_calculations.qmd Feb 19, 2024 - Do DOM quality and origin affect the upake and accumulation of a lipid soluble contaminant in a filter feeding ascidian species (Ciona) that can target small particle size classes? Unknown - 7.5 KB - MD5: 6b892375fb08d0a8745295c4db3a7b64
SUVA_simple.csv Feb 19, 2024 - Do DOM quality and origin affect the upake and accumulation of a lipid soluble contaminant in a filter feeding ascidian species (Ciona) that can target small particle size classes? Comma Separated Values - 2.2 KB - MD5: 3c2c78023ed64904b5d170bf5da3d2e4
Teflubenzuron water canister samples_2.csv Feb 19, 2024 - Do DOM quality and origin affect the upake and accumulation of a lipid soluble contaminant in a filter feeding ascidian species (Ciona) that can target small particle size classes? Comma Separated Values - 521 B - MD5: 29dc18cd7f6b33ac06922e3cdb03411d
00_README.txt Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius Plain Text - 9.4 KB - MD5: 510012e1edc19f3d637fa9c18e7c1d7d This file include basic information about the deposited files and methods used to obtain them.
01a_ccar_genome_v1_262scaffolds_fasta.txt Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius Plain Text - 1.6 GB - MD5: 084a69b6ff9f9d9e57ec0d58c1ccd6b7 This is the unmasked version of the filtered genome (262 scaffolds) used in some steps of the annotation (see article for details).
01b_ccar_genome_v1_262scaffolds_sm_fasta.txt Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius Plain Text - 1.6 GB - MD5: 3055c321971811144243b5d91b3998dd Datagenome This is the soft-masked version of the genome used in some steps of the annotation pipeline (see article for details). The genome was soft-masked using Repeatmodeler.
02a_ccar_genome_v1_262scaffolds_trna_gff3.txt Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius Plain Text - 2.6 MB - MD5: e1ff55cd7f6075ef495e208664c34d5c This file contains the transfer RNAs (tRNAs) predicted by the tool tRNAScan-SE.
02b_ccar_genome_v1_262scaffolds_rrna_gff3.txt Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius Plain Text - 1.6 MB - MD5: 47ca43fd1ed2cf989f2bbfa340f19723 This file contains annotations of ribosomal RNAs predicted by RNAammer.
02c_ccar_isoseq_hq_transcripts_fasta.txt Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius Plain Text - 646.7 MB - MD5: ffedfa19d89406f2305beae31e83a54b
02d_ccar_annotation_v5_gff3.txt Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius Plain Text - 212.8 MB - MD5: 54423b6fc680239a4171338b33a6f4f1

S5_Supplementary_non-Bayesian_graphs_and_calculations.qmd

Feb 19, 2024 - Do DOM quality and origin affect the upake and accumulation of a lipid soluble contaminant in a filter feeding ascidian species (Ciona) that can target small particle size classes?

Unknown - 7.5 KB -

SUVA_simple.csv

Feb 19, 2024 - Do DOM quality and origin affect the upake and accumulation of a lipid soluble contaminant in a filter feeding ascidian species (Ciona) that can target small particle size classes?

Comma Separated Values - 2.2 KB -

Teflubenzuron water canister samples_2.csv

Feb 19, 2024 - Do DOM quality and origin affect the upake and accumulation of a lipid soluble contaminant in a filter feeding ascidian species (Ciona) that can target small particle size classes?

Comma Separated Values - 521 B -

00_README.txt

Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius

Plain Text - 9.4 KB -

This file include basic information about the deposited files and methods used to obtain them.

01a_ccar_genome_v1_262scaffolds_fasta.txt

Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius

Plain Text - 1.6 GB -

This is the unmasked version of the filtered genome (262 scaffolds) used in some steps of the annotation (see article for details).

01b_ccar_genome_v1_262scaffolds_sm_fasta.txt

Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius

Plain Text - 1.6 GB -

Datagenome

This is the soft-masked version of the genome used in some steps of the annotation pipeline (see article for details). The genome was soft-masked using Repeatmodeler.

02a_ccar_genome_v1_262scaffolds_trna_gff3.txt

Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius

Plain Text - 2.6 MB -

This file contains the transfer RNAs (tRNAs) predicted by the tool tRNAScan-SE.

02b_ccar_genome_v1_262scaffolds_rrna_gff3.txt

Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius

Plain Text - 1.6 MB -

This file contains annotations of ribosomal RNAs predicted by RNAammer.

02c_ccar_isoseq_hq_transcripts_fasta.txt

Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius

Plain Text - 646.7 MB -

02d_ccar_annotation_v5_gff3.txt