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1,851 to 1,860 of 2,500 Results

S5_Supplementary_non-Bayesian_graphs_and_calculations.docx Feb 19, 2024 - Do DOM quality and origin affect the upake and accumulation of a lipid soluble contaminant in a filter feeding ascidian species (Ciona) that can target small particle size classes? MS Word - 247.2 KB - MD5: cb30a9028c143c61999331f46bdd17f7
S5_Supplementary_non-Bayesian_graphs_and_calculations.qmd Feb 19, 2024 - Do DOM quality and origin affect the upake and accumulation of a lipid soluble contaminant in a filter feeding ascidian species (Ciona) that can target small particle size classes? Unknown - 7.5 KB - MD5: 6b892375fb08d0a8745295c4db3a7b64
SUVA_simple.csv Feb 19, 2024 - Do DOM quality and origin affect the upake and accumulation of a lipid soluble contaminant in a filter feeding ascidian species (Ciona) that can target small particle size classes? Comma Separated Values - 2.2 KB - MD5: 3c2c78023ed64904b5d170bf5da3d2e4
Teflubenzuron water canister samples_2.csv Feb 19, 2024 - Do DOM quality and origin affect the upake and accumulation of a lipid soluble contaminant in a filter feeding ascidian species (Ciona) that can target small particle size classes? Comma Separated Values - 521 B - MD5: 29dc18cd7f6b33ac06922e3cdb03411d
Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius Feb 10, 2025 Valencia-Pesqueira, Laura Marian; Hoff, Siv Nam Khang; Tørresen, Ole Kristian; Jentoft, Sissel; Lefevre, Sjannie, 2025, "Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius", https://doi.org/10.18710/GXMSUH, DataverseNO, V2 This dataset contains the annotated version of the crucian carp (Carassius carassius) genome, including the annotation and other associated files. The full genome assembly (290 sequences) is available under NCBI Bioproject PRJNA1119394, together with the raw sequence data used for the de novo genome assembly (PacBio long reads, Illumina short reads...
00_README.txt Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius Plain Text - 9.4 KB - MD5: 510012e1edc19f3d637fa9c18e7c1d7d This file include basic information about the deposited files and methods used to obtain them.
01a_ccar_genome_v1_262scaffolds_fasta.txt Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius Plain Text - 1.6 GB - MD5: 084a69b6ff9f9d9e57ec0d58c1ccd6b7 This is the unmasked version of the filtered genome (262 scaffolds) used in some steps of the annotation (see article for details).
01b_ccar_genome_v1_262scaffolds_sm_fasta.txt Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius Plain Text - 1.6 GB - MD5: 3055c321971811144243b5d91b3998dd Datagenome This is the soft-masked version of the genome used in some steps of the annotation pipeline (see article for details). The genome was soft-masked using Repeatmodeler.
02a_ccar_genome_v1_262scaffolds_trna_gff3.txt Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius Plain Text - 2.6 MB - MD5: e1ff55cd7f6075ef495e208664c34d5c This file contains the transfer RNAs (tRNAs) predicted by the tool tRNAScan-SE.
02b_ccar_genome_v1_262scaffolds_rrna_gff3.txt Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius Plain Text - 1.6 MB - MD5: 47ca43fd1ed2cf989f2bbfa340f19723 This file contains annotations of ribosomal RNAs predicted by RNAammer.

S5_Supplementary_non-Bayesian_graphs_and_calculations.docx

Feb 19, 2024 - Do DOM quality and origin affect the upake and accumulation of a lipid soluble contaminant in a filter feeding ascidian species (Ciona) that can target small particle size classes?

MS Word - 247.2 KB -

S5_Supplementary_non-Bayesian_graphs_and_calculations.qmd

Feb 19, 2024 - Do DOM quality and origin affect the upake and accumulation of a lipid soluble contaminant in a filter feeding ascidian species (Ciona) that can target small particle size classes?

Unknown - 7.5 KB -

SUVA_simple.csv

Feb 19, 2024 - Do DOM quality and origin affect the upake and accumulation of a lipid soluble contaminant in a filter feeding ascidian species (Ciona) that can target small particle size classes?

Comma Separated Values - 2.2 KB -

Teflubenzuron water canister samples_2.csv

Feb 19, 2024 - Do DOM quality and origin affect the upake and accumulation of a lipid soluble contaminant in a filter feeding ascidian species (Ciona) that can target small particle size classes?

Comma Separated Values - 521 B -

Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius

Feb 10, 2025

Valencia-Pesqueira, Laura Marian; Hoff, Siv Nam Khang; Tørresen, Ole Kristian; Jentoft, Sissel; Lefevre, Sjannie, 2025, "Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius", https://doi.org/10.18710/GXMSUH, DataverseNO, V2

This dataset contains the annotated version of the crucian carp (Carassius carassius) genome, including the annotation and other associated files. The full genome assembly (290 sequences) is available under NCBI Bioproject PRJNA1119394, together with the raw sequence data used for the de novo genome assembly (PacBio long reads, Illumina short reads...

00_README.txt

Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius

Plain Text - 9.4 KB -

This file include basic information about the deposited files and methods used to obtain them.

01a_ccar_genome_v1_262scaffolds_fasta.txt

Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius

Plain Text - 1.6 GB -

This is the unmasked version of the filtered genome (262 scaffolds) used in some steps of the annotation (see article for details).

01b_ccar_genome_v1_262scaffolds_sm_fasta.txt

Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius

Plain Text - 1.6 GB -

Datagenome

This is the soft-masked version of the genome used in some steps of the annotation pipeline (see article for details). The genome was soft-masked using Repeatmodeler.

02a_ccar_genome_v1_262scaffolds_trna_gff3.txt

Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius

Plain Text - 2.6 MB -

This file contains the transfer RNAs (tRNAs) predicted by the tool tRNAScan-SE.

02b_ccar_genome_v1_262scaffolds_rrna_gff3.txt

Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius

Plain Text - 1.6 MB -

This file contains annotations of ribosomal RNAs predicted by RNAammer.

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