University of Oslo

Featured Dataverses

In order to use this feature you must have at least one published or linked dataverse.

Publish Dataverse

Are you sure you want to publish your dataverse? Once you do so it must remain published.

Publish Dataverse

This dataverse cannot be published because the dataverse it is in has not been published.

Delete Dataverse

Are you sure you want to delete your dataverse? You cannot undelete this dataverse.

1,861 to 1,870 of 2,500 Results

02c_ccar_isoseq_hq_transcripts_fasta.txt Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius Plain Text - 646.7 MB - MD5: ffedfa19d89406f2305beae31e83a54b
02d_ccar_annotation_v5_gff3.txt Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius Plain Text - 212.8 MB - MD5: 54423b6fc680239a4171338b33a6f4f1
03a_ccar_annotation_v5_proteins_fasta.txt Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius Plain Text - 55.7 MB - MD5: 2685ca29c2c6ab6e4843b20eec9ffe59 This is the predicted amino acid sequences from the genome (262 scaffolds) in fasta format. The sequences were extracted using the AGAT script "agat_sp_extract_sequences.pl" in Anaconda3 (2022.10 on Saga).
03b_ccar_annotation_v5_transcripts_fasta.txt Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius Plain Text - 228.7 MB - MD5: e3981b08eeb941b6770b6d8e592b8612 This is the predicted transcript sequences from the genome (262 scaffolds) in fasta format. The sequences were extracted using the AGAT script "agat_sp_extract_sequences.pl" in Anaconda3 (2022.10 on Saga).
04a_ccar_annotation_v5_kegg.txt Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius Plain Text - 5.3 MB - MD5: c544d1acf5320b0b9a4180c91e07d31f This file contains the output of the search for KEGG ortholog (KO) matches in the KEGG Ortholog database, found using the tool BlastKOALA (v. 3; https://www.kegg.jp/blastkoala/).
04b_ccar_annotation_v5_interproscan.txt Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius Plain Text - 245.2 MB - MD5: 44c621da5dce702d556d1324ce651cfc This is the output from the search run using InterProScan (5.62-94.0-foss-2022a on Saga) against the following databases (version): FunFam (4.3.0), SFLD (4), PANTHER (17.0), Gene3D (4.3.0), Hamap (2023_01), PRINTS (42.0), ProSiteProfiles (2022_05), Coils (2.2.1), SUPERFAMILY (1.75), SMART (9.0), CDD (3.20), PIRSR (2021_05), ProSitePatterns (2022_05...
04c_ccar_annotation_v5_swissprot_wGO_outfmt6.txt Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius Plain Text - 5.3 MB - MD5: 90654cd2c0e37c6ae591ba1ad6cee3b8 This is the blast output.
04d_ccar_annotation_v5_swissprot_hits_and_GO_v2.txt Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius Plain Text - 22.6 MB - MD5: 4d9cb0f41068006b862439ce3a7fd7ea This file contains protein products for hits in the Uniprot Swissprot database (release 2024_06, 27-Nov-2024), including Uniprot entry and symbol, product name, and gene ontology (GO) terms where these are available.
05_ccar_genome_v1_scaffold_107_mito_NCBI.txt Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius Plain Text - 3.2 KB - MD5: ede1f0b01f51653c8723e8656e6aaa5c This file contain the mitochondrial genome annotation in NCBI format. The annotation was made using the tool MitoAnnotator (
Replication Data for: Devonian–Carboniferous extension and Eurekan inversion along an inherited WNW–ESE-striking fault system in Billefjorden, Svalbard Apr 8, 2023 Koehl, Jean-Baptiste P.; Allaart, Lis; Noormets, Riko, 2023, "Replication Data for: Devonian–Carboniferous extension and Eurekan inversion along an inherited WNW–ESE-striking fault system in Billefjorden, Svalbard", https://doi.org/10.18710/UCRW4L, DataverseNO, V1 High-resolution version of the figures in the following manuscript: "Devonian–Carboniferous extension and Eurekan inversion along an inherited WNW–ESE-striking fault system in Billefjorden, Svalbard". High-resolution versions of the figures are necessary to identify individual structures presented and discussed in the text.

02c_ccar_isoseq_hq_transcripts_fasta.txt

Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius

Plain Text - 646.7 MB -

02d_ccar_annotation_v5_gff3.txt

Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius

Plain Text - 212.8 MB -

03a_ccar_annotation_v5_proteins_fasta.txt

Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius

Plain Text - 55.7 MB -

This is the predicted amino acid sequences from the genome (262 scaffolds) in fasta format. The sequences were extracted using the AGAT script "agat_sp_extract_sequences.pl" in Anaconda3 (2022.10 on Saga).

03b_ccar_annotation_v5_transcripts_fasta.txt

Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius

Plain Text - 228.7 MB -

This is the predicted transcript sequences from the genome (262 scaffolds) in fasta format. The sequences were extracted using the AGAT script "agat_sp_extract_sequences.pl" in Anaconda3 (2022.10 on Saga).

04a_ccar_annotation_v5_kegg.txt

Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius

Plain Text - 5.3 MB -

This file contains the output of the search for KEGG ortholog (KO) matches in the KEGG Ortholog database, found using the tool BlastKOALA (v. 3; https://www.kegg.jp/blastkoala/).

04b_ccar_annotation_v5_interproscan.txt

Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius

Plain Text - 245.2 MB -

This is the output from the search run using InterProScan (5.62-94.0-foss-2022a on Saga) against the following databases (version): FunFam (4.3.0), SFLD (4), PANTHER (17.0), Gene3D (4.3.0), Hamap (2023_01), PRINTS (42.0), ProSiteProfiles (2022_05), Coils (2.2.1), SUPERFAMILY (1.75), SMART (9.0), CDD (3.20), PIRSR (2021_05), ProSitePatterns (2022_05...

04c_ccar_annotation_v5_swissprot_wGO_outfmt6.txt

Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius

Plain Text - 5.3 MB -

This is the blast output.

04d_ccar_annotation_v5_swissprot_hits_and_GO_v2.txt

Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius

Plain Text - 22.6 MB -

This file contains protein products for hits in the Uniprot Swissprot database (release 2024_06, 27-Nov-2024), including Uniprot entry and symbol, product name, and gene ontology (GO) terms where these are available.

05_ccar_genome_v1_scaffold_107_mito_NCBI.txt

Feb 10, 2025 - Replication Data for: Chromosome-level de novo genome assembly of wild, anoxia-tolerant crucian carp, Carassius carassius

Plain Text - 3.2 KB -

This file contain the mitochondrial genome annotation in NCBI format. The annotation was made using the tool MitoAnnotator (

Replication Data for: Devonian–Carboniferous extension and Eurekan inversion along an inherited WNW–ESE-striking fault system in Billefjorden, Svalbard

Apr 8, 2023

Koehl, Jean-Baptiste P.; Allaart, Lis; Noormets, Riko, 2023, "Replication Data for: Devonian–Carboniferous extension and Eurekan inversion along an inherited WNW–ESE-striking fault system in Billefjorden, Svalbard", https://doi.org/10.18710/UCRW4L, DataverseNO, V1

High-resolution version of the figures in the following manuscript: "Devonian–Carboniferous extension and Eurekan inversion along an inherited WNW–ESE-striking fault system in Billefjorden, Svalbard". High-resolution versions of the figures are necessary to identify individual structures presented and discussed in the text.

Add Data

Share Dataverse

Link Dataverse

Reset Modifications