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51 to 60 of 2,907 Results

m.taxicola_maf0.011_biallelic_indremoved_with.outgroup_nomiss_no14no15_bcftoolsld0.8_25kb.vcf.gz Jun 22, 2026 - Supporting data for: A Natural Hybrid Zone Between Divergent Ecotypes of a Wood-Decay Fungus in Fennoscandia Gzip Archive - 88.7 MB - MD5: 69fcdf04c59ffb28b092dceb59ec6c85 VCF file with outgroup filtered on maf and no missingness, and LD pruned.
m.taxicola_maf0.011_biallelic_noindels_no14no15_nooutgroup.vcf.gz Jun 22, 2026 - Supporting data for: A Natural Hybrid Zone Between Divergent Ecotypes of a Wood-Decay Fungus in Fennoscandia Gzip Archive - 1.1 GB - MD5: 68e658a9bde238f280f8a2e6712d8961 VCF file without the outgroup and filtered on Maf.
m.taxicola_maf0.011_biallelic_noindels_onlyvariants_no14no15_nomiss.vcf.gz Jun 22, 2026 - Supporting data for: A Natural Hybrid Zone Between Divergent Ecotypes of a Wood-Decay Fungus in Fennoscandia Gzip Archive - 1.1 GB - MD5: 68e658a9bde238f280f8a2e6712d8961 VCF file without the outgroup, filtered on Maf and no missingness.
m.taxicola_maf0.011_biallelic_noindels_onlyvariants_no14no15_nomiss_bcftools0.8_25kb.vcf.gz Jun 22, 2026 - Supporting data for: A Natural Hybrid Zone Between Divergent Ecotypes of a Wood-Decay Fungus in Fennoscandia Gzip Archive - 321.6 MB - MD5: 168fffc0b4e4512b9ade2d9ae5d347dd VCF file without the outgroup, filtered on Maf and no missingness, and LD pruned.
Replication Data for: Changes in DNA Methylation During Anoxia and Reoxygenation in Crucian Carp Brain Jun 15, 2026 Winklhofer, Magdalena; Andersen, Øivind; Lefevre, Sjannie, 2025, "Replication Data for: Changes in DNA Methylation During Anoxia and Reoxygenation in Crucian Carp Brain", https://doi.org/10.18710/GSHJEB, DataverseNO, V3 This analysis contained the identification of DNA methylation sites in the context of CpG islands and differentially methylated regions (DMRs) with MethylScore. Further the mRNA sequencing data were analyzed to differentially expressed genes. Differentially expressed genes and identified DMRs were correlated. Finally DMRs and their expression chang...
00_README.txt Jun 15, 2026 - Replication Data for: Changes in DNA Methylation During Anoxia and Reoxygenation in Crucian Carp Brain Plain Text - 15.7 KB - MD5: 7904822c9162f8fde746f61adf45031e
08_deg_na_up_GOterms.csv.txt Jun 15, 2026 - Replication Data for: Changes in DNA Methylation During Anoxia and Reoxygenation in Crucian Carp Brain Plain Text - 3.0 KB - MD5: 47523f733b348141a79b7118ec4a861d
09_deg_na_down_GOterms.csv.txt Jun 15, 2026 - Replication Data for: Changes in DNA Methylation During Anoxia and Reoxygenation in Crucian Carp Brain Plain Text - 1.3 KB - MD5: 99250cb287996a6d7f5a553a4027d112
Background Data for: Ecosystem sequencing of the boreal forest mycobiome reveals high substrate specificity Jun 11, 2026 Markus Osaland Fjelde, 2026, "Background Data for: Ecosystem sequencing of the boreal forest mycobiome reveals high substrate specificity", https://doi.org/10.18710/IEMBSO, DataverseNO, V1 This dataset contains the mapfile used to link environmental DNA samples to sequencing libraries (Illumina paired-end reads, fungal ITS2) at PRJNA@. The mapfile contains the relationships between sample IDs, sequencing libraries (forward: R1/reverse: R2), barcodes (tags), and substrates (DNA isolation source).
00_README.txt Jun 11, 2026 - Background Data for: Ecosystem sequencing of the boreal forest mycobiome reveals high substrate specificity Plain Text - 4.2 KB - MD5: b0520a24835de0b6e190b9c43d4fd0f6

m.taxicola_maf0.011_biallelic_indremoved_with.outgroup_nomiss_no14no15_bcftoolsld0.8_25kb.vcf.gz

Jun 22, 2026 - Supporting data for: A Natural Hybrid Zone Between Divergent Ecotypes of a Wood-Decay Fungus in Fennoscandia

Gzip Archive - 88.7 MB -

VCF file with outgroup filtered on maf and no missingness, and LD pruned.

m.taxicola_maf0.011_biallelic_noindels_no14no15_nooutgroup.vcf.gz

Jun 22, 2026 - Supporting data for: A Natural Hybrid Zone Between Divergent Ecotypes of a Wood-Decay Fungus in Fennoscandia

Gzip Archive - 1.1 GB -

VCF file without the outgroup and filtered on Maf.

m.taxicola_maf0.011_biallelic_noindels_onlyvariants_no14no15_nomiss.vcf.gz

Jun 22, 2026 - Supporting data for: A Natural Hybrid Zone Between Divergent Ecotypes of a Wood-Decay Fungus in Fennoscandia

Gzip Archive - 1.1 GB -

VCF file without the outgroup, filtered on Maf and no missingness.

m.taxicola_maf0.011_biallelic_noindels_onlyvariants_no14no15_nomiss_bcftools0.8_25kb.vcf.gz

Jun 22, 2026 - Supporting data for: A Natural Hybrid Zone Between Divergent Ecotypes of a Wood-Decay Fungus in Fennoscandia

Gzip Archive - 321.6 MB -

VCF file without the outgroup, filtered on Maf and no missingness, and LD pruned.

Replication Data for: Changes in DNA Methylation During Anoxia and Reoxygenation in Crucian Carp Brain

Jun 15, 2026

Winklhofer, Magdalena; Andersen, Øivind; Lefevre, Sjannie, 2025, "Replication Data for: Changes in DNA Methylation During Anoxia and Reoxygenation in Crucian Carp Brain", https://doi.org/10.18710/GSHJEB, DataverseNO, V3

This analysis contained the identification of DNA methylation sites in the context of CpG islands and differentially methylated regions (DMRs) with MethylScore. Further the mRNA sequencing data were analyzed to differentially expressed genes. Differentially expressed genes and identified DMRs were correlated. Finally DMRs and their expression chang...

00_README.txt

Jun 15, 2026 - Replication Data for: Changes in DNA Methylation During Anoxia and Reoxygenation in Crucian Carp Brain

Plain Text - 15.7 KB -

08_deg_na_up_GOterms.csv.txt

Jun 15, 2026 - Replication Data for: Changes in DNA Methylation During Anoxia and Reoxygenation in Crucian Carp Brain

Plain Text - 3.0 KB -

09_deg_na_down_GOterms.csv.txt

Jun 15, 2026 - Replication Data for: Changes in DNA Methylation During Anoxia and Reoxygenation in Crucian Carp Brain

Plain Text - 1.3 KB -

Background Data for: Ecosystem sequencing of the boreal forest mycobiome reveals high substrate specificity

Jun 11, 2026

Markus Osaland Fjelde, 2026, "Background Data for: Ecosystem sequencing of the boreal forest mycobiome reveals high substrate specificity", https://doi.org/10.18710/IEMBSO, DataverseNO, V1

This dataset contains the mapfile used to link environmental DNA samples to sequencing libraries (Illumina paired-end reads, fungal ITS2) at PRJNA@. The mapfile contains the relationships between sample IDs, sequencing libraries (forward: R1/reverse: R2), barcodes (tags), and substrates (DNA isolation source).

00_README.txt

Jun 11, 2026 - Background Data for: Ecosystem sequencing of the boreal forest mycobiome reveals high substrate specificity

Plain Text - 4.2 KB -

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