University of Oslo

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61 to 70 of 2,500 Results

00_README.txt Sep 24, 2025 - Background data for "Combined short- and long-read metabarcoding of the soil fungi Archaeorhizomycetes reveals high phylogenetic diversity structured by vegetation and climate" Plain Text - 3.4 KB - MD5: 33785d08b1ac333e2c8d6522dda1c6cf Read me file describing the dataset Archaeorhizomycetes alignment and tree 2500 bp long read sequences
Archies_tree.newick Sep 24, 2025 - Background data for "Combined short- and long-read metabarcoding of the soil fungi Archaeorhizomycetes reveals high phylogenetic diversity structured by vegetation and climate" Unknown - 8.5 KB - MD5: e93a18bd1b2638986d16cf601fbd5dc9 Tree file in .newick format of 120 Archaeorhizomycetes OTUs from Norway
Archies_trimmed_alignment.fasta Sep 24, 2025 - Background data for "Combined short- and long-read metabarcoding of the soil fungi Archaeorhizomycetes reveals high phylogenetic diversity structured by vegetation and climate" Unknown - 457.2 KB - MD5: 823418450f706701b969d3aee49bb36b Alignment file in .fasta format of 120 Archaeorhizomycetes OTUs from Norway
Replication data for "Combined short- and long-read metabarcoding of the soil fungi Archaeorhizomycetes reveals high phylogenetic diversity structured by vegetation and climate" Sep 24, 2025 Thoen, Ella, 2025, "Replication data for "Combined short- and long-read metabarcoding of the soil fungi Archaeorhizomycetes reveals high phylogenetic diversity structured by vegetation and climate"", https://doi.org/10.18710/ZTNNBI, DataverseNO, V1 Archaeorhizomycetes is a class of globally widespread soil-dwelling fungi, originally proposed to be associated with plant roots, but their ecology and nutritional mode are not clearly defined. To increase the knowledge about Archaeorhizomycetes’ ecology and biogeography, we investigate how they are distributed along major environmental gradients,...
00_README.txt Sep 24, 2025 - Replication data for "Combined short- and long-read metabarcoding of the soil fungi Archaeorhizomycetes reveals high phylogenetic diversity structured by vegetation and climate" Plain Text - 6.9 KB - MD5: 982b511b83c968b770b50af5b6d844c4 Read me file including file description and instructions, as well as accesion numbers for the raw sequence data.
Archies_v.3.fasta_linsi_trimal.fasta_IQTree_MFP.treefile Sep 24, 2025 - Replication data for "Combined short- and long-read metabarcoding of the soil fungi Archaeorhizomycetes reveals high phylogenetic diversity structured by vegetation and climate" Unknown - 8.5 KB - MD5: e56125d61dda9b5de2cf8317f94b6a02 Phylogenetic tree file to compute distance classes in the R script
LRSmap1fwd.fasta Sep 24, 2025 - Replication data for "Combined short- and long-read metabarcoding of the soil fungi Archaeorhizomycetes reveals high phylogenetic diversity structured by vegetation and climate" Unknown - 3.2 KB - MD5: adff9d02052d5b36926fabb0e12e4485 Mapping file for bioinformatics. PacBio data, Plate 1 fwd primer and tags
LRSmap1rev.fasta Sep 24, 2025 - Replication data for "Combined short- and long-read metabarcoding of the soil fungi Archaeorhizomycetes reveals high phylogenetic diversity structured by vegetation and climate" Unknown - 3.4 KB - MD5: baba414a6be51f8486e091d81c19fdb2 Mapping file for bioinformatics. PacBio data, Plate 1 reverse primer and tags
LRSmap2fwd.fasta Sep 24, 2025 - Replication data for "Combined short- and long-read metabarcoding of the soil fungi Archaeorhizomycetes reveals high phylogenetic diversity structured by vegetation and climate" Unknown - 3.2 KB - MD5: fa07bec8269d49a158f45fa053625ec0 Mapping file for bioinformatics. PacBio data, Plate 2 fwd primer and tags
LRSmap2rev.fasta Sep 24, 2025 - Replication data for "Combined short- and long-read metabarcoding of the soil fungi Archaeorhizomycetes reveals high phylogenetic diversity structured by vegetation and climate" Unknown - 3.4 KB - MD5: 2c67b2e9557d946d3be8440381334ca2 Mapping file for bioinformatics. PacBio data, Plate 2 reverse primer and tags

00_README.txt

Sep 24, 2025 - Background data for "Combined short- and long-read metabarcoding of the soil fungi Archaeorhizomycetes reveals high phylogenetic diversity structured by vegetation and climate"

Plain Text - 3.4 KB -

Read me file describing the dataset Archaeorhizomycetes alignment and tree 2500 bp long read sequences

Archies_tree.newick

Sep 24, 2025 - Background data for "Combined short- and long-read metabarcoding of the soil fungi Archaeorhizomycetes reveals high phylogenetic diversity structured by vegetation and climate"

Unknown - 8.5 KB -

Tree file in .newick format of 120 Archaeorhizomycetes OTUs from Norway

Archies_trimmed_alignment.fasta

Sep 24, 2025 - Background data for "Combined short- and long-read metabarcoding of the soil fungi Archaeorhizomycetes reveals high phylogenetic diversity structured by vegetation and climate"

Unknown - 457.2 KB -

Alignment file in .fasta format of 120 Archaeorhizomycetes OTUs from Norway

Replication data for "Combined short- and long-read metabarcoding of the soil fungi Archaeorhizomycetes reveals high phylogenetic diversity structured by vegetation and climate"

Sep 24, 2025

Thoen, Ella, 2025, "Replication data for "Combined short- and long-read metabarcoding of the soil fungi Archaeorhizomycetes reveals high phylogenetic diversity structured by vegetation and climate"", https://doi.org/10.18710/ZTNNBI, DataverseNO, V1

Archaeorhizomycetes is a class of globally widespread soil-dwelling fungi, originally proposed to be associated with plant roots, but their ecology and nutritional mode are not clearly defined. To increase the knowledge about Archaeorhizomycetes’ ecology and biogeography, we investigate how they are distributed along major environmental gradients,...

00_README.txt

Sep 24, 2025 - Replication data for "Combined short- and long-read metabarcoding of the soil fungi Archaeorhizomycetes reveals high phylogenetic diversity structured by vegetation and climate"

Plain Text - 6.9 KB -

Read me file including file description and instructions, as well as accesion numbers for the raw sequence data.

Archies_v.3.fasta_linsi_trimal.fasta_IQTree_MFP.treefile

Sep 24, 2025 - Replication data for "Combined short- and long-read metabarcoding of the soil fungi Archaeorhizomycetes reveals high phylogenetic diversity structured by vegetation and climate"

Unknown - 8.5 KB -

Phylogenetic tree file to compute distance classes in the R script

LRSmap1fwd.fasta

Sep 24, 2025 - Replication data for "Combined short- and long-read metabarcoding of the soil fungi Archaeorhizomycetes reveals high phylogenetic diversity structured by vegetation and climate"

Unknown - 3.2 KB -

Mapping file for bioinformatics. PacBio data, Plate 1 fwd primer and tags